Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gm13823-201ENSMUST00000119930 345 ntBASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gm12017-201ENSMUST00000122453 1003 ntBASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gm44492-201ENSMUST00000197012 141 ntBASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gm42934-201ENSMUST00000196920 1345 ntBASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Daam2-202ENSMUST00000224595 1926 ntBASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav8-1A0A075B641 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Gm15427-201ENSMUST00000117288 531 ntBASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Gm12892-201ENSMUST00000117367 1146 ntBASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Gm6226-201ENSMUST00000117765 1146 ntBASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Gm5364-201ENSMUST00000216789 889 ntBASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 AC131997.1-201ENSMUST00000228611 1229 ntBASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms