Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Gm9824-201ENSMUST00000178707 561 ntBASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav7n-4A0A075B620 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Gm15393-201ENSMUST00000120499 219 ntBASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Gm27772-201ENSMUST00000184900 187 ntBASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Gm18766-201ENSMUST00000189811 808 ntBASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav7n-4A0A075B620 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms