Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mrpl40Q9Z2Q5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm15198-201ENSMUST00000117283 177 ntBASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm1335-201ENSMUST00000121653 386 ntBASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Mrpl40Q9Z2Q5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm23931-201ENSMUST00000103842 109 ntBASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm7399-201ENSMUST00000032395 858 ntBASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mrpl40Q9Z2Q5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Mrpl40Q9Z2Q5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Mrpl40Q9Z2Q5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms