Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Gm13297-201ENSMUST00000120205 934 ntBASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Gm3890-201ENSMUST00000182416 207 ntBASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lhx9Q9WUH2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Snord83b-201ENSMUST00000104546 94 ntBASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gm2991-201ENSMUST00000173338 480 ntBASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Mospd4-201ENSMUST00000180618 576 ntBASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gm37042-201ENSMUST00000193816 581 ntBASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gm18584-201ENSMUST00000203098 964 ntBASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gm5781-201ENSMUST00000219792 443 ntBASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gm7046-201ENSMUST00000221351 977 ntBASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lhx9Q9WUH2 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.21□□□□□ -0.45
Lhx9Q9WUH2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.21□□□□□ -0.45
Lhx9Q9WUH2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lhx9Q9WUH2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lhx9Q9WUH2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lhx9Q9WUH2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lhx9Q9WUH2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lhx9Q9WUH2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.21□□□□□ -0.45
Lhx9Q9WUH2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lhx9Q9WUH2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lhx9Q9WUH2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms