Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm25063-201ENSMUST00000104666 94 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm12948-201ENSMUST00000119406 682 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm24844-201ENSMUST00000158679 127 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm8815-201ENSMUST00000173809 620 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm18204-201ENSMUST00000209835 793 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm18968-201ENSMUST00000221319 862 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm14274-201ENSMUST00000117182 615 ntBASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm43778-201ENSMUST00000199438 199 ntBASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm45594-201ENSMUST00000211717 241 ntBASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.54□□□□□ -0.4
Col4a4Q9QZR9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms