Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Gm22018-201ENSMUST00000104357 131 ntBASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Gm5370-201ENSMUST00000187187 574 ntBASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3aQ9JKX8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Gm12502-201ENSMUST00000120197 444 ntBASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Gm15703-201ENSMUST00000120250 880 ntBASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3aQ9JKX8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms