Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpxQ9JHS4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm12859-201ENSMUST00000117834 427 ntBASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm21854-201ENSMUST00000179901 471 ntBASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm42612-201ENSMUST00000197986 623 ntBASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm43170-201ENSMUST00000199827 612 ntBASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm17795-201ENSMUST00000214505 757 ntBASIC11.8□□□□□ -0.52
ClpxQ9JHS4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm19220-201ENSMUST00000222682 803 ntBASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ClpxQ9JHS4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.79□□□□□ -0.52
ClpxQ9JHS4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms