Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Gm12217-201ENSMUST00000118858 696 ntBASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Gm12566-201ENSMUST00000121479 359 ntBASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Mir7221-201ENSMUST00000184009 72 ntBASIC12.6□□□□□ -0.39
Rrp8Q9DB85 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.6□□□□□ -0.39
Rrp8Q9DB85 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Gm37201-201ENSMUST00000191845 523 ntBASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Gm37986-201ENSMUST00000193285 383 ntBASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Gm44405-201ENSMUST00000198952 126 ntBASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Gm42997-202ENSMUST00000200321 985 ntBASIC12.6□□□□□ -0.39
Rrp8Q9DB85 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rrp8Q9DB85 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Gm7857-201ENSMUST00000117957 358 ntBASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Gm25043-201ENSMUST00000158604 212 ntBASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Gm38092-201ENSMUST00000195600 653 ntBASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Gm44262-201ENSMUST00000204969 372 ntBASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Gm44651-201ENSMUST00000207343 372 ntBASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.59□□□□□ -0.39
Rrp8Q9DB85 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Gm8385-201ENSMUST00000058999 643 ntBASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rrp8Q9DB85 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms