Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp4bQ9D8B3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp4bQ9D8B3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp4bQ9D8B3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chmp4bQ9D8B3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp4bQ9D8B3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chmp4bQ9D8B3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp4bQ9D8B3 Gm43417-201ENSMUST00000201586 5207 ntBASIC16.22■□□□□ 0.19
Chmp4bQ9D8B3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Gm27847-201ENSMUST00000183711 107 ntBASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Gm27375-201ENSMUST00000183799 107 ntBASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Rab3c-202ENSMUST00000223922 2398 ntBASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chmp4bQ9D8B3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp4bQ9D8B3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp4bQ9D8B3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp4bQ9D8B3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Chmp4bQ9D8B3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Gm16479-201ENSMUST00000121706 932 ntBASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Gm22331-201ENSMUST00000158066 136 ntBASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Gm37042-201ENSMUST00000193816 581 ntBASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Gm44772-201ENSMUST00000207623 1191 ntBASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp4bQ9D8B3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Gm37324-201ENSMUST00000194500 4504 ntBASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms