Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Olfr582-201ENSMUST00000098212 960 ntBASIC16.92■□□□□ 0.3
U2af1Q9D883 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
U2af1Q9D883 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
U2af1Q9D883 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
U2af1Q9D883 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
U2af1Q9D883 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.92■□□□□ 0.3
U2af1Q9D883 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.92■□□□□ 0.3
U2af1Q9D883 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.91■□□□□ 0.3
U2af1Q9D883 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
U2af1Q9D883 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
U2af1Q9D883 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
U2af1Q9D883 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC16.91■□□□□ 0.3
U2af1Q9D883 Gm13813-201ENSMUST00000120998 787 ntBASIC16.91■□□□□ 0.3
U2af1Q9D883 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.91■□□□□ 0.3
U2af1Q9D883 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
U2af1Q9D883 Mir6420-201ENSMUST00000185032 102 ntBASIC16.91■□□□□ 0.3
U2af1Q9D883 Gm43179-201ENSMUST00000198797 275 ntBASIC16.91■□□□□ 0.3
U2af1Q9D883 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
U2af1Q9D883 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
U2af1Q9D883 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
U2af1Q9D883 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.91■□□□□ 0.3
U2af1Q9D883 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
U2af1Q9D883 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.9■□□□□ 0.3
U2af1Q9D883 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
U2af1Q9D883 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.9■□□□□ 0.3
U2af1Q9D883 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
U2af1Q9D883 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.9■□□□□ 0.3
U2af1Q9D883 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
U2af1Q9D883 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Gm13316-201ENSMUST00000140537 691 ntBASIC16.9■□□□□ 0.3
U2af1Q9D883 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.9■□□□□ 0.3
U2af1Q9D883 Gm18041-201ENSMUST00000218210 618 ntBASIC16.9■□□□□ 0.3
U2af1Q9D883 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.9■□□□□ 0.3
U2af1Q9D883 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
U2af1Q9D883 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.89■□□□□ 0.3
U2af1Q9D883 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
U2af1Q9D883 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
U2af1Q9D883 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
U2af1Q9D883 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
U2af1Q9D883 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
U2af1Q9D883 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Gm14921-201ENSMUST00000118643 908 ntBASIC16.89■□□□□ 0.29
U2af1Q9D883 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.89■□□□□ 0.29
U2af1Q9D883 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC16.89■□□□□ 0.29
U2af1Q9D883 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Mospd4-201ENSMUST00000180618 576 ntBASIC16.89■□□□□ 0.29
U2af1Q9D883 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.89■□□□□ 0.29
U2af1Q9D883 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.89■□□□□ 0.29
U2af1Q9D883 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.89■□□□□ 0.29
U2af1Q9D883 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
U2af1Q9D883 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
U2af1Q9D883 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms