Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Gm11803-201ENSMUST00000119966 444 ntBASIC14.15□□□□□ -0.14
Cfap53Q9D439 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.15□□□□□ -0.14
Cfap53Q9D439 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Gm8810-201ENSMUST00000172895 754 ntBASIC14.15□□□□□ -0.14
Cfap53Q9D439 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.15□□□□□ -0.14
Cfap53Q9D439 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.15□□□□□ -0.14
Cfap53Q9D439 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.15□□□□□ -0.14
Cfap53Q9D439 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap53Q9D439 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.15□□□□□ -0.15
Cfap53Q9D439 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.14□□□□□ -0.15
Cfap53Q9D439 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Gm27839-201ENSMUST00000184242 106 ntBASIC14.14□□□□□ -0.15
Cfap53Q9D439 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.14□□□□□ -0.15
Cfap53Q9D439 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.14□□□□□ -0.15
Cfap53Q9D439 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap53Q9D439 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.13□□□□□ -0.15
Cfap53Q9D439 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Mir686-201ENSMUST00000102174 109 ntBASIC14.13□□□□□ -0.15
Cfap53Q9D439 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Gm24196-201ENSMUST00000179161 110 ntBASIC14.13□□□□□ -0.15
Cfap53Q9D439 Gm7063-201ENSMUST00000186840 981 ntBASIC14.13□□□□□ -0.15
Cfap53Q9D439 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.13□□□□□ -0.15
Cfap53Q9D439 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cfap53Q9D439 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.13□□□□□ -0.15
Cfap53Q9D439 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.13□□□□□ -0.15
Cfap53Q9D439 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cfap53Q9D439 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cfap53Q9D439 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cfap53Q9D439 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cfap53Q9D439 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.12□□□□□ -0.15
Cfap53Q9D439 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cfap53Q9D439 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cfap53Q9D439 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cfap53Q9D439 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cfap53Q9D439 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms