Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Gm26461-201ENSMUST00000175064 290 ntBASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Stag1Q9D3E6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.33■□□□□ 0.04
Stag1Q9D3E6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gm12058-201ENSMUST00000118614 437 ntBASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.32■□□□□ 0.04
Stag1Q9D3E6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gm13097-201ENSMUST00000210722 397 ntBASIC15.32■□□□□ 0.04
Stag1Q9D3E6 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Stag1Q9D3E6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms