Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Gm2423-201ENSMUST00000074863 733 ntBASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afb1Q9CQ70 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm12291-201ENSMUST00000121627 311 ntBASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm5866-201ENSMUST00000177881 973 ntBASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb1Q9CQ70 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Auts2-212ENSMUST00000178555 309 ntBASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Gm28693-202ENSMUST00000190758 331 ntBASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Gm18018-201ENSMUST00000198273 408 ntBASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Gm8463-201ENSMUST00000208573 613 ntBASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms