Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.84□□□□□ -0.35
Trim33Q99PP7 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.84□□□□□ -0.35
Trim33Q99PP7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim33Q99PP7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim33Q99PP7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trim33Q99PP7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim33Q99PP7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.83□□□□□ -0.36
Trim33Q99PP7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.83□□□□□ -0.36
Trim33Q99PP7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.83□□□□□ -0.36
Trim33Q99PP7 Gm8502-201ENSMUST00000185708 901 ntBASIC12.83□□□□□ -0.36
Trim33Q99PP7 Gm21147-201ENSMUST00000186046 913 ntBASIC12.83□□□□□ -0.36
Trim33Q99PP7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Gm8510-201ENSMUST00000189202 895 ntBASIC12.83□□□□□ -0.36
Trim33Q99PP7 Gm2316-201ENSMUST00000190613 921 ntBASIC12.83□□□□□ -0.36
Trim33Q99PP7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.83□□□□□ -0.36
Trim33Q99PP7 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.83□□□□□ -0.36
Trim33Q99PP7 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim33Q99PP7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Gm8602-201ENSMUST00000184045 607 ntBASIC12.82□□□□□ -0.36
Trim33Q99PP7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.82□□□□□ -0.36
Trim33Q99PP7 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.82□□□□□ -0.36
Trim33Q99PP7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.82□□□□□ -0.36
Trim33Q99PP7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms