Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smim3Q99PE5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Smim3Q99PE5 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smim3Q99PE5 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smim3Q99PE5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smim3Q99PE5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.94□□□□□ -0.66
Smim3Q99PE5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.94□□□□□ -0.66
Smim3Q99PE5 Psmb5-202ENSMUST00000227257 622 ntBASIC10.94□□□□□ -0.66
Smim3Q99PE5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.94□□□□□ -0.66
Smim3Q99PE5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smim3Q99PE5 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.93□□□□□ -0.66
Smim3Q99PE5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.93□□□□□ -0.66
Smim3Q99PE5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Rprl2-201ENSMUST00000157150 290 ntBASIC10.93□□□□□ -0.66
Smim3Q99PE5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Gm17971-201ENSMUST00000190239 806 ntBASIC10.93□□□□□ -0.66
Smim3Q99PE5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.93□□□□□ -0.66
Smim3Q99PE5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.93□□□□□ -0.66
Smim3Q99PE5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.93□□□□□ -0.66
Smim3Q99PE5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.93□□□□□ -0.66
Smim3Q99PE5 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smim3Q99PE5 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms