Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Gm15806-201ENSMUST00000120696 955 ntBASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Gm38671-201ENSMUST00000200573 130 ntBASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm6152-201ENSMUST00000151704 340 ntBASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm19931-201ENSMUST00000198920 368 ntBASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Gm16372-201ENSMUST00000073088 450 ntBASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.18□□□□□ -0.46
Chmp1b1Q99LU0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gm16202-201ENSMUST00000117532 544 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gm6447-201ENSMUST00000118905 835 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gm12138-201ENSMUST00000122180 951 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms