Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.82■□□□□ 0.12
RtcbQ99LF4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.82■□□□□ 0.12
RtcbQ99LF4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RtcbQ99LF4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.81■□□□□ 0.12
RtcbQ99LF4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Gm5369-201ENSMUST00000217499 588 ntBASIC15.81■□□□□ 0.12
RtcbQ99LF4 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RtcbQ99LF4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RtcbQ99LF4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Gm5616-201ENSMUST00000165252 384 ntBASIC15.8■□□□□ 0.12
RtcbQ99LF4 Gm8741-201ENSMUST00000174736 384 ntBASIC15.8■□□□□ 0.12
RtcbQ99LF4 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Gm9230-201ENSMUST00000188228 532 ntBASIC15.8■□□□□ 0.12
RtcbQ99LF4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RtcbQ99LF4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.79■□□□□ 0.12
RtcbQ99LF4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.79■□□□□ 0.12
RtcbQ99LF4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.79■□□□□ 0.12
RtcbQ99LF4 Gm15515-201ENSMUST00000117827 822 ntBASIC15.79■□□□□ 0.12
RtcbQ99LF4 Gm12314-201ENSMUST00000118104 538 ntBASIC15.79■□□□□ 0.12
RtcbQ99LF4 Gm11667-201ENSMUST00000119828 486 ntBASIC15.79■□□□□ 0.12
RtcbQ99LF4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.79■□□□□ 0.12
RtcbQ99LF4 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.79■□□□□ 0.12
RtcbQ99LF4 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.79■□□□□ 0.12
RtcbQ99LF4 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.79■□□□□ 0.12
RtcbQ99LF4 Gm10179-201ENSMUST00000086233 688 ntBASIC15.79■□□□□ 0.12
RtcbQ99LF4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RtcbQ99LF4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms