Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.81□□□□□ -0.04
Rfc4Q99J62 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.81□□□□□ -0.04
Rfc4Q99J62 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Gm44651-201ENSMUST00000207343 372 ntBASIC14.81□□□□□ -0.04
Rfc4Q99J62 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.81□□□□□ -0.04
Rfc4Q99J62 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.81□□□□□ -0.04
Rfc4Q99J62 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.8□□□□□ -0.04
Rfc4Q99J62 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Gm9083-201ENSMUST00000120423 819 ntBASIC14.8□□□□□ -0.04
Rfc4Q99J62 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.8□□□□□ -0.04
Rfc4Q99J62 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Gm22334-201ENSMUST00000158070 133 ntBASIC14.8□□□□□ -0.04
Rfc4Q99J62 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Gm25732-201ENSMUST00000175168 60 ntBASIC14.8□□□□□ -0.04
Rfc4Q99J62 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.8□□□□□ -0.04
Rfc4Q99J62 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.8□□□□□ -0.04
Rfc4Q99J62 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.8□□□□□ -0.04
Rfc4Q99J62 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rfc4Q99J62 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.79□□□□□ -0.04
Rfc4Q99J62 Gm24514-201ENSMUST00000174961 285 ntBASIC14.79□□□□□ -0.04
Rfc4Q99J62 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Gm37201-201ENSMUST00000191845 523 ntBASIC14.79□□□□□ -0.04
Rfc4Q99J62 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms