Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm23270-201ENSMUST00000104055 131 ntBASIC15.17■□□□□ 0.02
Col20a1Q923P0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm18056-201ENSMUST00000207670 568 ntBASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm18061-201ENSMUST00000208350 562 ntBASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm18063-201ENSMUST00000208529 568 ntBASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm18052-201ENSMUST00000208750 559 ntBASIC15.17■□□□□ 0.02
Col20a1Q923P0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.16■□□□□ 0.02
Col20a1Q923P0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Gm25043-201ENSMUST00000158604 212 ntBASIC15.16■□□□□ 0.02
Col20a1Q923P0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Gm37201-201ENSMUST00000191845 523 ntBASIC15.16■□□□□ 0.02
Col20a1Q923P0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Gm18041-201ENSMUST00000218210 618 ntBASIC15.16■□□□□ 0.02
Col20a1Q923P0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.16■□□□□ 0.02
Col20a1Q923P0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.16■□□□□ 0.02
Col20a1Q923P0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.15■□□□□ 0.02
Col20a1Q923P0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col20a1Q923P0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms