Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3d19Q91X43 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3d19Q91X43 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3d19Q91X43 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3d19Q91X43 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3d19Q91X43 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3d19Q91X43 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3d19Q91X43 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3d19Q91X43 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3d19Q91X43 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3d19Q91X43 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Gm10434-201ENSMUST00000101158 471 ntBASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Gm37489-201ENSMUST00000191883 159 ntBASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Gm7783-201ENSMUST00000204795 781 ntBASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3d19Q91X43 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.4□□□□□ -0.26
Sh3d19Q91X43 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Gm38341-201ENSMUST00000195357 515 ntBASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3d19Q91X43 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sh3d19Q91X43 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Sh3d19Q91X43 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.39□□□□□ -0.27
Sh3d19Q91X43 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3d19Q91X43 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sh3d19Q91X43 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3d19Q91X43 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3d19Q91X43 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3d19Q91X43 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3d19Q91X43 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms