Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.8□□□□□ -0.68
H1fooQ8VIK3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Gm14928-201ENSMUST00000120198 477 ntBASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Gm8463-201ENSMUST00000208573 613 ntBASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Gm6180-201ENSMUST00000065243 498 ntBASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.79□□□□□ -0.68
H1fooQ8VIK3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
H1fooQ8VIK3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Gm11918-201ENSMUST00000121660 179 ntBASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.78□□□□□ -0.68
H1fooQ8VIK3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms