Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Gm45776-201ENSMUST00000212366 1522 ntBASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Gm37580-201ENSMUST00000192408 2800 ntBASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc9Q8VC31 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Gm11779-201ENSMUST00000118541 368 ntBASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Ccdc9Q8VC31 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Ccdc9Q8VC31 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc9Q8VC31 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc9Q8VC31 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc9Q8VC31 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc9Q8VC31 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc9Q8VC31 Gm38292-201ENSMUST00000192646 3045 ntBASIC15.46■□□□□ 0.06
Ccdc9Q8VC31 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc9Q8VC31 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc9Q8VC31 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc9Q8VC31 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc9Q8VC31 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms