Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Gm8213-201ENSMUST00000118191 441 ntBASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Gm45743-201ENSMUST00000212701 2795 ntBASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cchcr1Q8K2I2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cchcr1Q8K2I2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cchcr1Q8K2I2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cchcr1Q8K2I2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cchcr1Q8K2I2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cchcr1Q8K2I2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cchcr1Q8K2I2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cchcr1Q8K2I2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Gm8515-201ENSMUST00000194852 576 ntBASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Gm7287-201ENSMUST00000205267 602 ntBASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cchcr1Q8K2I2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms