Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.17□□□□□ -0.3
CopaQ8CIE6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.17□□□□□ -0.3
CopaQ8CIE6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.17□□□□□ -0.3
CopaQ8CIE6 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.17□□□□□ -0.3
CopaQ8CIE6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Gm4271-201ENSMUST00000174444 973 ntBASIC13.16□□□□□ -0.3
CopaQ8CIE6 Gm5370-201ENSMUST00000187187 574 ntBASIC13.16□□□□□ -0.3
CopaQ8CIE6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.16□□□□□ -0.3
CopaQ8CIE6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopaQ8CIE6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.15□□□□□ -0.3
CopaQ8CIE6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.15□□□□□ -0.3
CopaQ8CIE6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Mir874-201ENSMUST00000104769 76 ntBASIC13.15□□□□□ -0.3
CopaQ8CIE6 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CopaQ8CIE6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.15□□□□□ -0.3
CopaQ8CIE6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.15□□□□□ -0.3
CopaQ8CIE6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopaQ8CIE6 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.15□□□□□ -0.31
CopaQ8CIE6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CopaQ8CIE6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CopaQ8CIE6 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms