Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm25857-201ENSMUST00000082788 129 ntBASIC12.99□□□□□ -0.33
Clip4Q8CI96 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.99□□□□□ -0.33
Clip4Q8CI96 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.98□□□□□ -0.33
Clip4Q8CI96 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Clip4Q8CI96 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.98□□□□□ -0.33
Clip4Q8CI96 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Gm10012-201ENSMUST00000078252 192 ntBASIC12.98□□□□□ -0.33
Clip4Q8CI96 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip4Q8CI96 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.97□□□□□ -0.33
Clip4Q8CI96 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.97□□□□□ -0.33
Clip4Q8CI96 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms