Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gm8227-201ENSMUST00000223306 571 ntBASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.22■□□□□ 0.03
Rbm28Q8CGC6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Gm27243-201ENSMUST00000183964 521 ntBASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Gm19931-201ENSMUST00000198920 368 ntBASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Gm45865-201ENSMUST00000211815 945 ntBASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Gm7046-201ENSMUST00000221351 977 ntBASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbm28Q8CGC6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Rbm28Q8CGC6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rbm28Q8CGC6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Gm15370-201ENSMUST00000117158 253 ntBASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Gm13297-201ENSMUST00000120205 934 ntBASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Gm17208-201ENSMUST00000168388 535 ntBASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Mospd4-201ENSMUST00000180618 576 ntBASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Gm37489-201ENSMUST00000191883 159 ntBASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbm28Q8CGC6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.19■□□□□ 0.02
Rbm28Q8CGC6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbm28Q8CGC6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Rbm28Q8CGC6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbm28Q8CGC6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbm28Q8CGC6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rbm28Q8CGC6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbm28Q8CGC6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.19■□□□□ 0.02
Rbm28Q8CGC6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rbm28Q8CGC6 Gm4986-201ENSMUST00000119731 549 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms