Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Gm44124-201ENSMUST00000204159 472 ntBASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Gm45668-201ENSMUST00000211271 493 ntBASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Gm18624-201ENSMUST00000220966 658 ntBASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lrif1Q8CDD9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms