Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Gm42550-201ENSMUST00000201553 960 ntBASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Gm26035-201ENSMUST00000083065 308 ntBASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lysmd4Q8CC84 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Gm7063-201ENSMUST00000186840 981 ntBASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Gm19184-201ENSMUST00000196798 928 ntBASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lysmd4Q8CC84 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lysmd4Q8CC84 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lysmd4Q8CC84 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lysmd4Q8CC84 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Lysmd4Q8CC84 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Lysmd4Q8CC84 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.52□□□□□ -0.56
Lysmd4Q8CC84 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lysmd4Q8CC84 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms