Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Gm10434-201ENSMUST00000101158 471 ntBASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Gm44405-201ENSMUST00000198952 126 ntBASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Gm18935-201ENSMUST00000212692 664 ntBASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Gm14760-201ENSMUST00000121831 999 ntBASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Gm45331-201ENSMUST00000209868 554 ntBASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Gm45925-201ENSMUST00000218882 744 ntBASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Morn2-202ENSMUST00000227729 656 ntBASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Alx1Q8C8B0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Gm15198-201ENSMUST00000117283 177 ntBASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Gm12058-201ENSMUST00000118614 437 ntBASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx1Q8C8B0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Alx1Q8C8B0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.96□□□□□ -0.02
Alx1Q8C8B0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Alx1Q8C8B0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Alx1Q8C8B0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx1Q8C8B0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Alx1Q8C8B0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.95□□□□□ -0.02
Alx1Q8C8B0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.95□□□□□ -0.02
Alx1Q8C8B0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Alx1Q8C8B0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.95□□□□□ -0.02
Alx1Q8C8B0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx1Q8C8B0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx1Q8C8B0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx1Q8C8B0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx1Q8C8B0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms