Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Uba3Q8C878 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.55□□□□□ -0.24
Uba3Q8C878 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.55□□□□□ -0.24
Uba3Q8C878 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.55□□□□□ -0.24
Uba3Q8C878 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.55□□□□□ -0.24
Uba3Q8C878 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Uba3Q8C878 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Uba3Q8C878 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.55□□□□□ -0.24
Uba3Q8C878 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.55□□□□□ -0.24
Uba3Q8C878 Gm22121-201ENSMUST00000175148 54 ntBASIC13.55□□□□□ -0.24
Uba3Q8C878 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.55□□□□□ -0.24
Uba3Q8C878 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.55□□□□□ -0.24
Uba3Q8C878 Gm32025-201ENSMUST00000217960 307 ntBASIC13.55□□□□□ -0.24
Uba3Q8C878 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.55□□□□□ -0.24
Uba3Q8C878 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Uba3Q8C878 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Uba3Q8C878 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.55□□□□□ -0.24
Uba3Q8C878 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Uba3Q8C878 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Uba3Q8C878 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.54□□□□□ -0.24
Uba3Q8C878 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Uba3Q8C878 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Gm23931-201ENSMUST00000103842 109 ntBASIC13.54□□□□□ -0.24
Uba3Q8C878 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.54□□□□□ -0.24
Uba3Q8C878 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Uba3Q8C878 Gm12291-201ENSMUST00000121627 311 ntBASIC13.54□□□□□ -0.24
Uba3Q8C878 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Gm6222-202ENSMUST00000182143 629 ntBASIC13.54□□□□□ -0.24
Uba3Q8C878 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.54□□□□□ -0.24
Uba3Q8C878 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.54□□□□□ -0.24
Uba3Q8C878 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.54□□□□□ -0.24
Uba3Q8C878 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.54□□□□□ -0.24
Uba3Q8C878 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Uba3Q8C878 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Uba3Q8C878 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Uba3Q8C878 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.54□□□□□ -0.24
Uba3Q8C878 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Uba3Q8C878 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Gm25261-201ENSMUST00000157416 134 ntBASIC13.53□□□□□ -0.24
Uba3Q8C878 Gm25927-201ENSMUST00000175058 117 ntBASIC13.53□□□□□ -0.24
Uba3Q8C878 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Uba3Q8C878 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Uba3Q8C878 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Mir339-201ENSMUST00000083659 96 ntBASIC13.53□□□□□ -0.24
Uba3Q8C878 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.53□□□□□ -0.24
Uba3Q8C878 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms