Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Gm12390-201ENSMUST00000117897 397 ntBASIC14.18□□□□□ -0.14
Trim9Q8C7M3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Gm26927-201ENSMUST00000182385 965 ntBASIC14.18□□□□□ -0.14
Trim9Q8C7M3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim9Q8C7M3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Gm27682-201ENSMUST00000183930 110 ntBASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim9Q8C7M3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Gm17150-201ENSMUST00000165577 381 ntBASIC14.16□□□□□ -0.14
Trim9Q8C7M3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms