Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Usp44Q8C2S0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.04■□□□□ -0
Usp44Q8C2S0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.04■□□□□ -0
Usp44Q8C2S0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.04■□□□□ -0
Usp44Q8C2S0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.04■□□□□ -0
Usp44Q8C2S0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.04■□□□□ -0
Usp44Q8C2S0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Gm37424-201ENSMUST00000191727 561 ntBASIC15.04■□□□□ -0
Usp44Q8C2S0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.04■□□□□ -0
Usp44Q8C2S0 Gm19309-201ENSMUST00000218295 205 ntBASIC15.04■□□□□ -0
Usp44Q8C2S0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.04■□□□□ -0
Usp44Q8C2S0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Usp44Q8C2S0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp44Q8C2S0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Gm11964-201ENSMUST00000120982 444 ntBASIC15.03■□□□□ -0
Usp44Q8C2S0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.03■□□□□ -0
Usp44Q8C2S0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Gm18062-201ENSMUST00000208020 547 ntBASIC15.03■□□□□ -0
Usp44Q8C2S0 Gm18055-201ENSMUST00000208254 547 ntBASIC15.03■□□□□ -0
Usp44Q8C2S0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Usp44Q8C2S0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp44Q8C2S0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.02■□□□□ -0
Usp44Q8C2S0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp44Q8C2S0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp44Q8C2S0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.02■□□□□ -0
Usp44Q8C2S0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Usp44Q8C2S0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Usp44Q8C2S0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp44Q8C2S0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp44Q8C2S0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Usp44Q8C2S0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Usp44Q8C2S0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp44Q8C2S0 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.02■□□□□ -0
Usp44Q8C2S0 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.02■□□□□ -0
Usp44Q8C2S0 Gm14760-201ENSMUST00000121831 999 ntBASIC15.02■□□□□ -0
Usp44Q8C2S0 Gm16379-201ENSMUST00000161469 348 ntBASIC15.02■□□□□ -0
Usp44Q8C2S0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp44Q8C2S0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp44Q8C2S0 Gm8762-201ENSMUST00000193486 339 ntBASIC15.02■□□□□ -0
Usp44Q8C2S0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms