Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Matn2-203ENSMUST00000226766 3252 ntBASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm16479-201ENSMUST00000121706 932 ntBASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm27331-201ENSMUST00000183705 60 ntBASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm27486-201ENSMUST00000184923 80 ntBASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm10146-201ENSMUST00000072739 309 ntBASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf3Q8C120 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Gm27847-201ENSMUST00000183711 107 ntBASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Gm27375-201ENSMUST00000183799 107 ntBASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Gm37497-201ENSMUST00000195830 798 ntBASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms