Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Gm11531-201ENSMUST00000117614 555 ntBASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Gm31256-201ENSMUST00000194705 506 ntBASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Sh3rf2Q8BZT2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Gm14921-201ENSMUST00000118643 908 ntBASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Gm13875-201ENSMUST00000120162 282 ntBASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Gm5950-201ENSMUST00000213337 772 ntBASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf2Q8BZT2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf2Q8BZT2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf2Q8BZT2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.02□□□□□ -0.32
Sh3rf2Q8BZT2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf2Q8BZT2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.02□□□□□ -0.32
Sh3rf2Q8BZT2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.02□□□□□ -0.32
Sh3rf2Q8BZT2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf2Q8BZT2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf2Q8BZT2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf2Q8BZT2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Sh3rf2Q8BZT2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf2Q8BZT2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms