Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Gm13875-201ENSMUST00000120162 282 ntBASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Gm16505-201ENSMUST00000179981 232 ntBASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.64□□□□□ -0.23
Rd3Q8BRE0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Mir7221-201ENSMUST00000184009 72 ntBASIC13.64□□□□□ -0.23
Rd3Q8BRE0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gm25214-201ENSMUST00000104573 129 ntBASIC13.63□□□□□ -0.23
Rd3Q8BRE0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Rps4l-202ENSMUST00000204242 789 ntBASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.63□□□□□ -0.23
Rd3Q8BRE0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rd3Q8BRE0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms