Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.58□□□□□ -0.71
Smco3Q8BQM7 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Gm13365-201ENSMUST00000121188 973 ntBASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Gm24158-201ENSMUST00000175263 71 ntBASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Gm19931-201ENSMUST00000198920 368 ntBASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Gm5425-201ENSMUST00000214125 459 ntBASIC10.58□□□□□ -0.72
Smco3Q8BQM7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smco3Q8BQM7 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gm25287-201ENSMUST00000103846 110 ntBASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gm22918-201ENSMUST00000103855 110 ntBASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms