Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 AC153954.1-201ENSMUST00000216959 255 ntBASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col16a1Q8BLX7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Gm16397-201ENSMUST00000122201 494 ntBASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Gm38355-201ENSMUST00000192514 1570 ntBASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Gm12795-201ENSMUST00000117594 539 ntBASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Mir7677-201ENSMUST00000184226 67 ntBASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col16a1Q8BLX7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Gm22138-201ENSMUST00000158748 128 ntBASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Gm10774-201ENSMUST00000188689 204 ntBASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 AC099645.1-201ENSMUST00000226476 1105 ntBASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms