Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Gm37424-201ENSMUST00000191727 561 ntBASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Gm8213-201ENSMUST00000118191 441 ntBASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Gm11803-201ENSMUST00000119966 444 ntBASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Gm8598-201ENSMUST00000221184 836 ntBASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Depdc1bQ8BH88 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Gm16202-201ENSMUST00000117532 544 ntBASIC14□□□□□ -0.17
Depdc1bQ8BH88 Gm13392-201ENSMUST00000117708 150 ntBASIC14□□□□□ -0.17
Depdc1bQ8BH88 Gm12384-201ENSMUST00000119228 919 ntBASIC14□□□□□ -0.17
Depdc1bQ8BH88 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Gm22331-201ENSMUST00000158066 136 ntBASIC14□□□□□ -0.17
Depdc1bQ8BH88 Gm43818-201ENSMUST00000200605 466 ntBASIC14□□□□□ -0.17
Depdc1bQ8BH88 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14□□□□□ -0.17
Depdc1bQ8BH88 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Gm10478-201ENSMUST00000084451 396 ntBASIC14□□□□□ -0.17
Depdc1bQ8BH88 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14□□□□□ -0.17
Depdc1bQ8BH88 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Gm42863-201ENSMUST00000197875 2958 ntBASIC14□□□□□ -0.17
Depdc1bQ8BH88 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Depdc1bQ8BH88 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Gm14350-201ENSMUST00000116642 640 ntBASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.99□□□□□ -0.17
Depdc1bQ8BH88 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms