Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Samm50Q8BGH2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Samm50Q8BGH2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.11■□□□□ 0.01
Samm50Q8BGH2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Samm50Q8BGH2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Samm50Q8BGH2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Samm50Q8BGH2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Samm50Q8BGH2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Gm6152-201ENSMUST00000151704 340 ntBASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Itm2b-204ENSMUST00000228637 783 ntBASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Matn2-203ENSMUST00000226766 3252 ntBASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.1■□□□□ 0.01
Samm50Q8BGH2 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Gm11814-201ENSMUST00000119515 929 ntBASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Gm13829-201ENSMUST00000119600 138 ntBASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.09■□□□□ 0.01
Samm50Q8BGH2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Gm18473-201ENSMUST00000220543 868 ntBASIC15.09■□□□□ 0.01
Samm50Q8BGH2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Samm50Q8BGH2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Samm50Q8BGH2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Samm50Q8BGH2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Samm50Q8BGH2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Samm50Q8BGH2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Samm50Q8BGH2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Samm50Q8BGH2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.08■□□□□ 0.01
Samm50Q8BGH2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.08■□□□□ 0.01
Samm50Q8BGH2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Samm50Q8BGH2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Samm50Q8BGH2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Samm50Q8BGH2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Samm50Q8BGH2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Gm13612-201ENSMUST00000119276 390 ntBASIC15.08■□□□□ 0
Samm50Q8BGH2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Gm8652-201ENSMUST00000181363 964 ntBASIC15.08■□□□□ 0
Samm50Q8BGH2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.08■□□□□ 0
Samm50Q8BGH2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Gm6266-201ENSMUST00000203844 806 ntBASIC15.08■□□□□ 0
Samm50Q8BGH2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Samm50Q8BGH2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.08■□□□□ 0
Samm50Q8BGH2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms