Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Mir6546-201ENSMUST00000184460 62 ntBASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Gm4482-201ENSMUST00000200876 742 ntBASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Gm9996-201ENSMUST00000070359 913 ntBASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trnp1Q80ZI1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Gm16397-201ENSMUST00000122201 494 ntBASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Gm25881-201ENSMUST00000157783 103 ntBASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Mir6958-201ENSMUST00000184207 73 ntBASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Mir7677-201ENSMUST00000184226 67 ntBASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trnp1Q80ZI1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Gm12196-201ENSMUST00000120954 262 ntBASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Gm37246-201ENSMUST00000192665 835 ntBASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Gm43962-201ENSMUST00000203898 190 ntBASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Gm17827-201ENSMUST00000211825 742 ntBASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trnp1Q80ZI1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms