Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.31□□□□□ -0.44
Vrk1Q80X41 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Gm26956-201ENSMUST00000182176 986 ntBASIC12.31□□□□□ -0.44
Vrk1Q80X41 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.31□□□□□ -0.44
Vrk1Q80X41 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Snord83b-201ENSMUST00000104546 94 ntBASIC12.3□□□□□ -0.44
Vrk1Q80X41 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Gm12997-201ENSMUST00000120207 640 ntBASIC12.3□□□□□ -0.44
Vrk1Q80X41 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.3□□□□□ -0.44
Vrk1Q80X41 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.3□□□□□ -0.44
Vrk1Q80X41 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.3□□□□□ -0.44
Vrk1Q80X41 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vrk1Q80X41 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vrk1Q80X41 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.29□□□□□ -0.44
Vrk1Q80X41 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vrk1Q80X41 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vrk1Q80X41 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vrk1Q80X41 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vrk1Q80X41 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.29□□□□□ -0.44
Vrk1Q80X41 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Vrk1Q80X41 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms