Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm6334-201ENSMUST00000207083 228 ntBASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.72□□□□□ -0.37
Pcdh8Q7TSK3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Gm18584-201ENSMUST00000203098 964 ntBASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Cts7-204ENSMUST00000225321 1257 ntBASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh8Q7TSK3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh8Q7TSK3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh8Q7TSK3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh8Q7TSK3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh8Q7TSK3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh8Q7TSK3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh8Q7TSK3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pcdh8Q7TSK3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh8Q7TSK3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh8Q7TSK3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Pcdh8Q7TSK3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pcdh8Q7TSK3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Gm11978-201ENSMUST00000122315 466 ntBASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Gm3890-201ENSMUST00000182416 207 ntBASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Gm38341-201ENSMUST00000195357 515 ntBASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh8Q7TSK3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms