Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps54Q5SPW0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps54Q5SPW0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Vps54Q5SPW0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps54Q5SPW0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Vps54Q5SPW0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Vps54Q5SPW0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.43■□□□□ 0.06
Vps54Q5SPW0 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.43■□□□□ 0.06
Vps54Q5SPW0 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps54Q5SPW0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Gm13786-201ENSMUST00000122371 333 ntBASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Gm16296-201ENSMUST00000159905 325 ntBASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Gm10608-202ENSMUST00000213924 676 ntBASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps54Q5SPW0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Gm29396-201ENSMUST00000185659 716 ntBASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Gm42627-201ENSMUST00000197347 224 ntBASIC15.41■□□□□ 0.06
Vps54Q5SPW0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps54Q5SPW0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms