Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mdc1Q5PSV9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mdc1Q5PSV9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Mdc1Q5PSV9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Mdc1Q5PSV9 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC16.6■□□□□ 0.25
Mdc1Q5PSV9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mdc1Q5PSV9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mdc1Q5PSV9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mdc1Q5PSV9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mdc1Q5PSV9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Mdc1Q5PSV9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Gm15515-201ENSMUST00000117827 822 ntBASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Gm4993-201ENSMUST00000118719 1174 ntBASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Gm19353-201ENSMUST00000184561 445 ntBASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Gm7600-201ENSMUST00000209657 785 ntBASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mdc1Q5PSV9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mdc1Q5PSV9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mdc1Q5PSV9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mdc1Q5PSV9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mdc1Q5PSV9 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Gm13611-201ENSMUST00000118269 318 ntBASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Mdc1Q5PSV9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mdc1Q5PSV9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Mdc1Q5PSV9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mdc1Q5PSV9 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mdc1Q5PSV9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC16.56■□□□□ 0.24
Mdc1Q5PSV9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms