Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13□□□□□ -0.33
Bdp1Q571C7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Bdp1Q571C7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Bdp1Q571C7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13□□□□□ -0.33
Bdp1Q571C7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Gm15595-201ENSMUST00000120840 961 ntBASIC12.99□□□□□ -0.33
Bdp1Q571C7 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Gm9507-202ENSMUST00000180157 654 ntBASIC12.99□□□□□ -0.33
Bdp1Q571C7 Gm17877-201ENSMUST00000192578 814 ntBASIC12.99□□□□□ -0.33
Bdp1Q571C7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.99□□□□□ -0.33
Bdp1Q571C7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Bdp1Q571C7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.98□□□□□ -0.33
Bdp1Q571C7 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.98□□□□□ -0.33
Bdp1Q571C7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Gm5100-201ENSMUST00000195631 589 ntBASIC12.98□□□□□ -0.33
Bdp1Q571C7 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.98□□□□□ -0.33
Bdp1Q571C7 Gm18460-201ENSMUST00000208088 464 ntBASIC12.98□□□□□ -0.33
Bdp1Q571C7 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Gm40879-201ENSMUST00000220759 612 ntBASIC12.98□□□□□ -0.33
Bdp1Q571C7 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Gm3332-201ENSMUST00000189337 928 ntBASIC12.98□□□□□ -0.33
Bdp1Q571C7 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.98□□□□□ -0.33
Bdp1Q571C7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.98□□□□□ -0.33
Bdp1Q571C7 Gm9645-201ENSMUST00000197131 792 ntBASIC12.98□□□□□ -0.33
Bdp1Q571C7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Bdp1Q571C7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Bdp1Q571C7 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms