Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Gm5950-201ENSMUST00000213337 772 ntBASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Gm25214-201ENSMUST00000104573 129 ntBASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Gm5904-201ENSMUST00000210286 865 ntBASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Gm30285-201ENSMUST00000214614 422 ntBASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Thoc7-209ENSMUST00000225325 765 ntBASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rc3h1Q4VGL6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Gm2546-201ENSMUST00000182630 991 ntBASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Gm37319-201ENSMUST00000193500 636 ntBASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.86□□□□□ -0.03
Rc3h1Q4VGL6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Gm14381-201ENSMUST00000122105 414 ntBASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Gm26083-201ENSMUST00000157904 193 ntBASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rc3h1Q4VGL6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms