Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fam196aQ3USH1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fam196aQ3USH1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Mir6546-201ENSMUST00000184460 62 ntBASIC12.91□□□□□ -0.34
Fam196aQ3USH1 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.91□□□□□ -0.34
Fam196aQ3USH1 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fam196aQ3USH1 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Gm8018-201ENSMUST00000173536 789 ntBASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.9□□□□□ -0.34
Fam196aQ3USH1 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fam196aQ3USH1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Fam196aQ3USH1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Fam196aQ3USH1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Fam196aQ3USH1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
Fam196aQ3USH1 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm15881-201ENSMUST00000148792 942 ntBASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm5616-201ENSMUST00000165252 384 ntBASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm8741-201ENSMUST00000174736 384 ntBASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm23153-201ENSMUST00000175323 313 ntBASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm28882-201ENSMUST00000185504 314 ntBASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm34023-201ENSMUST00000195539 217 ntBASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.89□□□□□ -0.35
Fam196aQ3USH1 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.89□□□□□ -0.35
Fam196aQ3USH1 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms