Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Gm12030-201ENSMUST00000121917 223 ntBASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Rprl1-201ENSMUST00000158050 327 ntBASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Gm2965-201ENSMUST00000198365 343 ntBASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Gm4157-201ENSMUST00000211647 679 ntBASIC11.76□□□□□ -0.53
Spg11Q3UHA3 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Spg11Q3UHA3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Gm5805-201ENSMUST00000072779 456 ntBASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Gm16380-201ENSMUST00000077997 478 ntBASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Gm8737-201ENSMUST00000122208 642 ntBASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Gm5870-201ENSMUST00000196461 282 ntBASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Gm5455-201ENSMUST00000058710 715 ntBASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Spg11Q3UHA3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spg11Q3UHA3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms