Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Col5a2Q3U962 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Col5a2Q3U962 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC15.08■□□□□ 0
Col5a2Q3U962 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Col5a2Q3U962 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.08■□□□□ 0
Col5a2Q3U962 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.08■□□□□ 0
Col5a2Q3U962 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col5a2Q3U962 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col5a2Q3U962 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col5a2Q3U962 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.07■□□□□ 0
Col5a2Q3U962 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.07■□□□□ 0
Col5a2Q3U962 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.07■□□□□ 0
Col5a2Q3U962 Gm23085-201ENSMUST00000157849 293 ntBASIC15.07■□□□□ 0
Col5a2Q3U962 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.07■□□□□ 0
Col5a2Q3U962 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.07■□□□□ 0
Col5a2Q3U962 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC15.07■□□□□ 0
Col5a2Q3U962 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.07■□□□□ 0
Col5a2Q3U962 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col5a2Q3U962 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.06■□□□□ 0
Col5a2Q3U962 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col5a2Q3U962 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.06■□□□□ 0
Col5a2Q3U962 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.06■□□□□ 0
Col5a2Q3U962 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Col5a2Q3U962 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.06■□□□□ 0
Col5a2Q3U962 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.06■□□□□ 0
Col5a2Q3U962 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col5a2Q3U962 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.05■□□□□ 0
Col5a2Q3U962 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Col5a2Q3U962 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col5a2Q3U962 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col5a2Q3U962 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Col5a2Q3U962 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col5a2Q3U962 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col5a2Q3U962 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col5a2Q3U962 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col5a2Q3U962 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col5a2Q3U962 Gm11989-201ENSMUST00000117240 672 ntBASIC15.05■□□□□ -0
Col5a2Q3U962 Gm11362-201ENSMUST00000118838 850 ntBASIC15.05■□□□□ -0
Col5a2Q3U962 Gm15595-201ENSMUST00000120840 961 ntBASIC15.05■□□□□ -0
Col5a2Q3U962 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.05■□□□□ -0
Col5a2Q3U962 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col5a2Q3U962 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.05■□□□□ -0
Col5a2Q3U962 Gm23119-201ENSMUST00000158610 140 ntBASIC15.05■□□□□ -0
Col5a2Q3U962 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col5a2Q3U962 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.05■□□□□ -0
Col5a2Q3U962 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col5a2Q3U962 Gm37246-201ENSMUST00000192665 835 ntBASIC15.05■□□□□ -0
Col5a2Q3U962 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.05■□□□□ -0
Col5a2Q3U962 Gm34023-201ENSMUST00000195539 217 ntBASIC15.05■□□□□ -0
Col5a2Q3U962 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms