Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.19□□□□□ -0.62
Q3U1D9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Q3U1D9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.19□□□□□ -0.62
Q3U1D9 Gm14921-201ENSMUST00000118643 908 ntBASIC11.19□□□□□ -0.62
Q3U1D9 Gm12291-201ENSMUST00000121627 311 ntBASIC11.19□□□□□ -0.62
Q3U1D9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Q3U1D9 Gm20482-202ENSMUST00000174729 825 ntBASIC11.19□□□□□ -0.62
Q3U1D9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.19□□□□□ -0.62
Q3U1D9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.19□□□□□ -0.62
Q3U1D9 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.19□□□□□ -0.62
Q3U1D9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.19□□□□□ -0.62
Q3U1D9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Q3U1D9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.19□□□□□ -0.62
Q3U1D9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.19□□□□□ -0.62
Q3U1D9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Q3U1D9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Q3U1D9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Q3U1D9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.18□□□□□ -0.62
Q3U1D9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Q3U1D9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Q3U1D9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.18□□□□□ -0.62
Q3U1D9 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.18□□□□□ -0.62
Q3U1D9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Gm26083-201ENSMUST00000157904 193 ntBASIC11.18□□□□□ -0.62
Q3U1D9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.18□□□□□ -0.62
Q3U1D9 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.18□□□□□ -0.62
Q3U1D9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.18□□□□□ -0.62
Q3U1D9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.18□□□□□ -0.62
Q3U1D9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.18□□□□□ -0.62
Q3U1D9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Q3U1D9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.18□□□□□ -0.62
Q3U1D9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Q3U1D9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Q3U1D9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms